Table 1.

Association of knee OA in African Americans with SNP robustly associated with knee OA in prior studies.

SNPGeneChrRisk/Other AlleleSNP Effect in European WhitesSNP Effect in African Americans
Frequency of Risk AlleleORRefFrequency of Risk Allele in AAPower to Detect OR of Magnitude Seen in WhitesOR (95% CI)P Value from Metaanalysis
rs4730250*7q22 (DUS4L)7G / A0.171.179, 100.010.10NANA
rs143383GDF520T / C0.59–0.681.16110.120.460.92 (0.68–1.24)0.59
rs11842874MCF2L13A / G0.91–0.941.17120.770.561.00 (0.80–1.26)0.98
rs6976GLT8D13T / C0.371.1280.150.340.99 (0.75–1.30)0.95
rs11177GNL33A / G0.381.1280.170.360.98 (0.75–1.27)0.87
rs4836732ASTN29C / T0.471.2080.670.791.11 (0.90–1.35)0.33
rs9350591FILIP1; SENP66T / C0.111.1880.120.540.90 (0.67–1.21)0.48
rs10492367*KLHDC5; PTHLH12T / G0.191.1480.010.09NANA
rs835487CHST1112G / A0.341.1380.640.510.93 (0.77–1.15)0.53
rs12107036TP633G / A0.521.2180.350.901.12 (0.91–1.38)0.29
rs8044769FTO16C / T0.501.1180.760.320.94 (0.75–1.17)0.56
rs10948172SUPT3H; CDC5L6C / T0.291.1480.300.590.95 (0.77–1.16)0.60
  • * SNP with a minor allele frequency < 0.05 were excluded from the metaanalysis.

  • Power based on 742 cases and 475 controls, p = 0.05, and population prevalence of knee OA = 0.35.

  • OR adjusted for age, sex, and population stratification. OA: osteoarthritis; SNP: single-nucleotide polymorphism; Chr: chromosome; Ref: reference; AA: African Americans; NA: not applicable.