SE Brazil* | NE Brazil* | Total** | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Variables | Case % | Cont. % | OR | 95% CI | p | Case % | Cont. % | OR | 95% CI | p | Case % | Cont. % | OR | 95% CI | pa | pc |
Alleles | ||||||||||||||||
’14bp INDEL | ||||||||||||||||
14-bp DEL | 52.50 | 59.18 | 1.00 | 55.00 | 62.20 | 1.00 | 53.16 | 60.58 | 1.00 | |||||||
14-bp INS | 47.50 | 40.82 | 1.30 | 0.81–2.10 | 0.283 | 45.00 | 37.80 | 2.02 | 0.94–4.48 | 0.075 | 46.84 | 39.42 | 1.49 | 1.00–2.23 | 0.053 | 0.424 |
’+3003 C/T | ||||||||||||||||
’+3003 C | 8.57 | 13.27 | 1.00 | 12.00 | 6.69 | 1.00 | 9.47 | 10.22 | 1.00 | |||||||
’+3003 T | 91.43 | 86.73 | 1.68 | 0.80–3.45 | 0.165 | 88.00 | 93.31 | 0.35 | 0.10–1.19 | 0.096 | 90.53 | 89.78 | 1.13 | 0.60–2.10 | 0.705 | |
’+3010 C/G | ||||||||||||||||
’+3010 C | 61.79 | 52.40 | 1.00 | 68.00 | 54.33 | 1.00 | 63.42 | 53.30 | 1.00 | |||||||
’+3010 G | 38.21 | 47.60 | 0.71 | 0.44–1.14 | 0.151 | 32.00 | 45.67 | 0.40 | 0.18–0.86 | 0.021 | 36.58 | 46.70 | 0.59 | 0.39–0.87 | 0.008 | 0.064 |
’+3027 A/C | ||||||||||||||||
’+3027 A | 3.57 | 5.78 | 1.00 | 6.00 | 3.54 | 1.00 | 4.21 | 4.74 | 1.00 | |||||||
’+3027 C | 96.43 | 94.22 | 2.27 | 0.75–6.48 | 0.131 | 94.00 | 96.46 | 0.17 | 0.03–1.09 | 0.054 | 95.79 | 95.26 | 1.25 | 0.46–3.19 | 0.654 | |
’+3035 C/T | ||||||||||||||||
’+3035 C | 83.57 | 85.37 | 1.00 | 80.00 | 87.01 | 1.00 | 82.63 | 86.13 | 1.00 | |||||||
’+3035 T | 16.43 | 14.63 | 1.15 | 0.60–2.25 | 0.681 | 20.00 | 12.99 | 4.33 | 1.47–3.85 | 0.010 | 17.37 | 13.87 | 1.66 | 0.95–2.95 | 0.080 | |
’+3142 C/G | ||||||||||||||||
’+3142 C | 38.21 | 46.60 | 1.00 | 31.00 | 44.88 | 1.00 | 36.32 | 45.80 | 1.00 | |||||||
’+3142 G | 61.79 | 53.40 | 1.41 | 0.88–2.28 | 0.153 | 69.00 | 55.12 | 2.74 | 1.26–6.13 | 0.012 | 63.68 | 54.20 | 1.74 | 1.17–2.61 | 0.006 | 0.048 |
’+3187 A/G | ||||||||||||||||
’+3187 A | 75.36 | 74.15 | 1.00 | 86.96 | 70.08 | 1.00 | 78.23 | 72.26 | 1.00 | |||||||
’+3187 G | 24.64 | 25.85 | 0.86 | 0.51–1.48 | 0.585 | 13.04 | 29.92 | 0.15 | 0.05–0.40 | 0.000 | 21.77 | 27.74 | 0.57 | 0.36–0.89 | 0.013 | 0.104 |
’+3196 C/G | ||||||||||||||||
’+3196 C | 68.21 | 74.14 | 1.00 | 76.09 | 76.38 | 1.00 | 70.16 | 75.18 | 1.00 | |||||||
’+3196 G | 31.79 | 25.86 | 1.28 | 0.76–2.20 | 0.352 | 23.91 | 23.62 | 0.91 | 0.37–2.21 | 0.833 | 29.84 | 24.82 | 1.20 | 0.77–1.88 | 0.428 | |
Genotypes*** | ||||||||||||||||
’14-bp DEL/14-bp DEL | 30.71 | 38.78 | 0.71 | 0.36–1.45 | 0.344 | 38.00 | 40.16 | 0.63 | 0.21–1.85 | 0.403 | 32.63 | 39.42 | 0.67 | 0.38–1.19 | 0.169 | |
’14-bp DEL/14-bp INS | 43.57 | 40.82 | 1.14 | 0.58–2.27 | 0.697 | 34.00 | 44.09 | 0.62 | 0.20–1.85 | 0.391 | 41.05 | 42.34 | 0.98 | 0.56–1.78 | 0.942 | |
’14-bp INS/14-bp INS | 25.71 | 20.41 | 1.32 | 0.60–3.03 | 0.503 | 28.00 | 15.75 | 1.32 | 0.60–3.03 | 0.503 | 26.32 | 18.25 | 1.82 | 0.92–3.70 | 0.094 | |
’+3003 C/+3003 C | 2.00 | 0.00 | 0.992 | 0.53 | 0.00 | 0.987 | ||||||||||
’+3003 C/+3003 T | 17.14 | 26.53 | 0.55 | 0.25–1.22 | 0.138 | 20.00 | 13.39 | 2.94 | 0.71–12.5 | 0.140 | 17.89 | 20.44 | 0.80 | 0.40–1.59 | 0.516 | |
’+3003 T/+3003 T | 82.86 | 73.47 | 1.82 | 0.82–4.00 | 0.138 | 78.00 | 86.61 | 0.31 | 0.07–1.22 | 0.100 | 81.58 | 79.56 | 1.19 | 0.60–2.33 | 0.605 | |
’+3010 C/+3010 C | 36.43 | 28.77 | 1.67 | 0.81–3.57 | 0.177 | 46.00 | 29.13 | 2.44 | 0.81–8.33 | 0.116 | 38.95 | 28.94 | 1.96 | 1.06–3.70 | 0.033 | 0.792 |
’+3010 C/+3010 G | 50.71 | 47.26 | 0.83 | 0.42–1.61 | 0.590 | 44.00 | 50.39 | 1.12 | 0.39–3.33 | 0.834 | 48.95 | 48.72 | 0.90 | 0.52–1.56 | 0.717 | |
’+3010 G/+3010 G | 12.86 | 23.97 | 0.64 | 0.27–1.56 | 0.316 | 10.00 | 20.47 | 0.20 | 0.04–0.83 | 0.032 | 12.11 | 22.34 | 0.44 | 0.21–0.92 | 0.027 | 0.648 |
’+3027 A/+3027 A | 0.00 | 0.68 | 0.986 | 0.00 | 0.79 | 0.994 | 0.00 | 0.73 | 0.983 | |||||||
’+3027 A/+3027 C | 7.14 | 10.20 | 0.68 | 0.21–2.38 | 0.532 | 12.00 | 5.51 | 8.33 | 1.08–100.0 | 0.044 | 8.42 | 8.03 | 1.28 | 0.45–3.85 | 0.647 | |
’+3027 C/+3027 C | 92.86 | 89.12 | 1.00 | 0.35–2.70 | 0.998 | 88.00 | 93.70 | 0.13 | 0.02–0.98 | 0.049 | 91.58 | 91.24 | 1.01 | 0.35–2.70 | 0.992 | |
’+3035 C/+3035 C | 68.57 | 72.79 | 0.78 | 0.36–1.61 | 0.497 | 66.00 | 76.38 | 0.78 | 0.36–0.63 | 0.493 | 67.89 | 74.45 | 0.53 | 0.27–1.00 | 0.055 | |
’+3035 C/+3035 T | 30.00 | 25.17 | 1.43 | 0.62–3.13 | 0.362 | 28.00 | 21.26 | 4.55 | 1.16–25.0 | 0.042 | 29.47 | 23.36 | 1.92 | 1.00–3.85 | 0.055 | |
’+3035 T/+3035 T | 1.43 | 2.04 | 0.37 | 5.26–9.18 | 0.414 | 6.00 | 2.36 | 5.88 | 0.36–100.0 | 0.255 | 2.63 | 2.19 | 1.16 | 0.20–8.33 | 0.873 | |
’+3142 C/+3142 C | 13.57 | 21.77 | 0.68 | 0.29–1.69 | 0.395 | 10.00 | 20.47 | 0.20 | 0.04–0.83 | 0.032 | 12.63 | 21.17 | 0.46 | 0.22–0.94 | 0.034 | 0.816 |
’+3142 C/+3142 G | 49.29 | 49.66 | 0.78 | 0.39–1.52 | 0.454 | 42.00 | 48.82 | 0.95 | 0.33–2.78 | 0.927 | 47.37 | 49.27 | 0.83 | 0.48–1.45 | 0.525 | |
’+3142 G/+3142 G | 37.14 | 28.57 | 1.72 | 0.84–3.70 | 0.147 | 48.00 | 30.71 | 2.86 | 0.95–9.09 | 0.066 | 40.00 | 29.56 | 2.04 | 1.14–3.85 | 0.021 | 0.504 |
’+3187 A/+3187 A | 58.57 | 53.06 | 1.22 | 0.63–2.38 | 0.559 | 76.09 | 49.61 | 5.88 | 1.82–25.0 | 0.005 | 62.90 | 51.46 | 1.85 | 1.05–3.23 | 0.035 | 0.840 |
’+3187 A/+3187 G | 33.57 | 42.18 | 0.83 | 0.42–1.67 | 0.611 | 21.74 | 40.94 | 0.46 | 0.13–1.52 | 0.206 | 30.65 | 41.61 | 0.70 | 0.39–1.25 | 0.230 | |
’+3187 G/+3187 G | 7.86 | 4.76 | 0.89 | 0.27–3.57 | 0.857 | 2.17 | 9.45 | 0.03 | 0.00–0.29 | 0.008 | 6.45 | 6.93 | 0.43 | 0.16–1.14 | 0.080 | |
’+3196 C/+3196 C | 46.43 | 55.17 | 0.68 | 0.34–1.32 | 0.253 | 63.04 | 60.63 | 1.35 | 0.45–4.17 | 0.585 | 50.54 | 57.72 | 0.80 | 0.45–1.41 | 0.442 | |
’+3196 C/+3196 G | 43.57 | 37.93 | 1.47 | 0.74–2.94 | 0.281 | 26.09 | 31.50 | 1.47 | 0.74–2.94 | 0.281 | 39.25 | 34.93 | 1.16 | 0.65–2.08 | 0.607 | |
’+3196 G/+3196 G | 10.00 | 6.90 | 1.10 | 0.35–4.00 | 0.883 | 10.87 | 7.87 | 1.67 | 0.24–1.25 | 0.613 | 10.22 | 7.35 | 1.28 | 0.48–3.70 | 0.632 |
↵a Some comparisons did not remain statistically significant at the 0.05 significance level for the alleles (alphac = 0.0063) and genotype (alphac = 0.0021) distribution, after the Bonferroni correction.
↵* Adjusted by sex, skin color, and age.
↵** Adjusted by sex, skin color, age, and place of origin.
↵*** Genotype frequencies were calculated by comparing each genotype against the others.